Supermicro 5039MS-H8TRF 3U MicroCloud 8Node 8Tray Each Node Xeon E3-1200 64GB 2xGbE 2x3.5 SATA R1600W Embedded Hyperconverged High Density Server

SKU SYS-5039MS-H8TRF Category

Authorized Partner

Note: All products ship globally from withiin USA from our faciilities or distributor/manufacturer warehouses. Custom servers are built and tested directly by manufacturer and current eta ~ 4-6 weeks subject to component availabilty. Fill out your server requirements below. Best, qualified, approved and accurate pricing direct from manufacturer vs high priced configurators.


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For price match/beat please submit competitor quote. Only valid for fully configured systems. (Quotes from manufacturer authorized partners only)

Submit Requirements for Custom Server Quote
Note - for multi-node servers, below selections will be for each node.
For other OS, please specify in comments section below
Ideal and customizable for Network Appliance, Security Appliance, Video Signage Display Player, Kiosk, Internet of Things (IoT) applications where data aggregation and local analytics is needed. You can use this embedded unit as a general purpose Small Business server with Windows, Linux or other Operating System or load your own industry specific software application on the device to make it a cloud connected system for IoT applications. The data collected from these edge devices can be sent to the cloud for Analytics, Machine Learning (ML) or Artificial Intelligence (AI) insights and applications. This server is great for low power high density storage applications. 

Key Features

12 hot-swap trays with 1 Node per Tray in 3U form-factor. Each Node :

  • Single socket H4 (LGA 1151) supports Intel® Xeon® processor E3-1200 v6/v5, Intel® 7th/6th Gen. Core™ i3 series, Intel® Celeron® and Intel® Pentium®
  • 2x 3.5″ SATA3 by default; 2x 2.5″ SATA3 HDDs w/ Optional kits
  • Up to 64GB ECC UDIMM DDR4-2400MHz in 4 sockets
  • 2 GbE LAN ports via Intel i350, 1 dedicated IPMI LAN port
  • 1 PCI-E 3.0 x8 and 1 Micro-LP
  • 2 USB 2.0, 1 VGA, 1 COM port, (with KVM dongle)
  • 1 USB 3.0 (Type A), 1 SATA DOM
  • 4 heavy duty hot-swap 8cm fans with optimal cooling zone (per system)
  • 1600W Redundant power supplies Titanium Level Certified (per system)

Price shown is for server barebone (chassis, motherboard, power supply) only. To learn more and/or get pricing for complete system configuration with CPU, memory, hard drive etc, please use ‘Request Quote’ or contact us by email or phone and we will configure and quote your system asap.

We accept all major credit cards e.g. MasterCard, Visa, American Express, Discover etc. Please review our Terms and Conditions and Return, Refund and Repair policy prior to purchase.


Supermicro Servers Featuring Intel Xeon® E3-1200 Processor Series

The latest Intel® Xeon® processor E3-1200 v5 product family-based platform is a smart investment for a wide range of business needs and sizes. In addition to gains in CPU performance, CPU performance per watt, and graphics performance, Intel Xeon processor E3-1200 v5 product family-based platforms offer fast access to data, protect the data’s integrity, and have proven reliability for a range of business needs. Explore the expanded product line to discover new options for data center graphics, in addition to traditional entry-level server and workstation applications. Built for Professionals Step up to the performance and visuals demanded by professional-grade CAD or media and entertainment applications. With Intel Xeon processor E3-1200 v5 product family-based workstations, you’ll find the capabilities that get designers, engineers, and animators started. Accelerate exploration of complex data with the graphics performance of Intel® HD Graphics P530. Improve the integrity and uptime of design data with ECC memory technology. And with Intel® vPro™ technology, you can make sure your workstations are as secure and manageable as any PC in your organization’s fleet.

Supermicro offers the highest density, performance per watt, and broadest range of computing solutions optimized for Intel’s latest Xeon E3-1200 v5 and Xeon D-1500 processors. With our new generation UP systems, customers can quickly deploy scalable, performance optimized solutions that are exactly the best fit for their applications. Combined with Supermicro’s architecture innovations and energy efficient technologies, our Green Computing solutions help customers obtain maximum performance per watt, per dollar, per square foot to lower their overall TCO.”  

Charles Liang, President and CEO of Supermicro

Server Systems Management

Supermicro Server Manager (SSM) provides capabilities to monitor the health of server components including memory, hard drives and RAID controllers. It enables the datacenter administrator to monitor and manage power usage across all Supermicro servers allowing users to maximize their CPU payload while mitigating the risk of tripped circuit. Firmware upgrades on Supermicro servers became easier now with a couple of clicks. Administrators can now mount an ISO image on multiple servers and reboot the servers with those images. The tool also provides pre-defined reports and many more features that will make managing Supermicro servers simpler. Download the SSM_brochure for more info or download Supermicro SuperDoctor® device monitoring and management software.

Technical Specifications

Mfr Part # SYS-5039MS-H8TRF
Motherboard MBD-X11SSD-F 
CPU Single Socket H4 (LGA 1151) supports:; Intel® Xeon® processor E3-1200 v6/v5,; Intel® 7th/6th Gen Core™ i3,; Intel® Pentium®,; Intel® Celeron® processors; CPU TDP up to 80W
Memory Capacity 4x 288-pin DDR4 DIMM slots; Supports up to 64 GB DDR4 ECC Un-Buffered memory (UDIMM)
Memory Type 2400MHz/2133MHz ECC DDR4 SDRAM 72-bit, 288-pin gold-plated UDIMMs
DIMM Sizes 16GB, 8GB, 4GB
Memory Voltage 1.2 V
Error Detection Corrects single-bit errors; Detects double-bit errors (using ECC memory)
PCI-Express 1 PCI-E 3.0 x8 Low-profile slot; 1 Micro-LP for Dual GbE (pre-installed); 10GbE or IB AOC optional
Micro-LP NIC Intel® i350 GbE controller; Dual RJ-45 connectors; Supports 10BASE-T, 100BASE-TX, and 1000BASE-T, RJ45 output; Intel® I/O Acceleration Technology (I/O AT); (Networking options)
Chipset Intel® C236 chipset
SATA SATA3 (6Gbps) via C236 controller
IPMI Support for Intelligent Platform Management Interface v.2.0; IPMI 2.0 with virtual media over LAN and KVM over LAN support; ASPEED AST2400 BMC
Headers 1x Type A USB 3.0
Graphics ASPEED AST2400 Graphics (BMC with Graphic controller)
SATA 2 SATA3 (6Gbps) ports
LAN 2 RJ45 Gigabit Ethernet LAN ports; 1 RJ45 Dedicated IPMI LAN port
DOM SATA DOM (Disk on Module) power connector support
KVM 1 VGA, 1 COM and 2 USB 2.0 (with KVM dongle)
BIOS Type 128Mb SPI Flash EEPROM with AMI BIOS
BIOS Features DMI 2.3; ACPI 1.0 / 2.0; USB Keyboard support; SMBIOS 2.3
Switch Power / UID
Form Factor 3U
Height 5.21″ (132.5 mm)
Width 17.26″ (438.4 mm)
Depth 23.2″ (589 mm)
Package 11.65″ (H) x 26.26″ (W) x 34″ (D)
Weight Net Weight: 62.2 lbs (28.21 kg); Gross Weight: 88 lbs (39.92 kg)
Color Black
Buttons Power On/Off button
LEDs Power LED; Node status LED
Internal 2 Hot-swap 3.5″ SATA3 (6Gbps) HDDs per node (or 2x 2.5″ SATA3 with optional kits); up to 16 HDDs total; Enterprise SATA HDD only recommended
Fans 4 Heavy duty 8cm fans with optimal cooling zone
Total Output Power 800W/1600W
(W x H x L)
76 x 40.4 x 336 mm
Input 100-127Vac / 10-7A / 50-60Hz; 200-240Vac / 11-8A / 50-60Hz
+12V Max: 66A / Min: 0A (100-127Vac); Max: 133A / Min: 0A (200-240Vac)
+5Vsb Max: 1A / Min: 0A
Output Type 27 Pairs Gold Finger Connector
CPU Monitors for CPU Cores, +3.3V, +5V, +12V, +3.3V Standby, +5V Standby, VBAT, Memory, Chipset Voltages.; 3-Phase-switching voltage regulator with auto-sense from 0.5V-2.3V
FAN Cooling zone
Temperature Monitoring for CPU and chassis environment
RoHS RoHS Compliant
Environmental Spec. Operating Temperature:; 10°C to 35°C (50°F to 95°F); Non-operating Temperature:; -40°C to 70°C (-40°F to 158°F); Operating Relative Humidity:; 8% to 90% (non-condensing); Non-operating Relative Humidity:; 5% to 95% (non-condensing)

Additional information

Weight 88 lbs
Dimensions 23.2 × 17.2 × 5.2 in






Product Type

64-bit Processing


Graphics Controller


Number of SATA


Number of Total Memory


Number of Processors


Number of 3.5" Bays


Number of Total Slots


Number of PCI Express


Product Family

Total Number of USB


Number of USB 3.0


Memory Standard




Memory Technology


Processor Socket

Socket H4 LGA-1151

Rack Height



Form Factor


Processor Supported


Controller Type

Serial ATA/600

Maximum Memory

64 GB


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